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Calanoida of the World Oceans

There are 1962 species of Calanoida that are commonly found in the World Oceans.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 1962 total species, 434 of these species (22%) have COI barcodes (from this or any ocean).
  • There are a total of 11289 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the World Oceans region):
  • Of the 1962 total species, 434 of these species (22%) have World Oceans-collected COI barcodes.
  • There are a total of 11289 "World Oceans-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 1962 total species in this region, 1528 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the World Oceans region, out of a total of 1962 possible species:
    • There are COI barcodes for 434 species ( 22% coverage ).
      •
    • There are 12S barcodes for 53 species ( 2% coverage ). 
    • There are 16S barcodes for 138 species ( 7% coverage ).
    • There are 18S barcodes for 275 species ( 14% coverage ).
    • There are 28S barcodes for 239 species ( 12% coverage ).
    Change Region   [ World ] [ Arctic ] [ North Atlantic ] [ South Atlantic ] [ Southern Ocean ] [ Indian Ocean ] [ South Pacific ]
    [ North Pacific ] [ Baltic Sea ] [ Mediterranean Sea ] [ Australia subregion ]
    -----> Click here to go back to the Group Summary page. <-----


    Calanoida of the World Oceans
    MZGdb DATA FILES

    Database-Version:   v2025-m03-01    		 --->   Mode-A   <---

    COI barcodes = 11289
    12S barcodes = 100
    16S barcodes = 2304
    18S barcodes = 802
    28S barcodes = 632
    		 Mode-B

    Not Applicable

    B = A for "world"         		Mode-C

    COI records = 12259
    12S records = 100
    16S records = 2390
    18S records = 915
    28S records = 688
    		 Mode-D

    Not Applicable

    D = C for "world"
    FASTA file MZGdb fasta (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb fasta (mode-B)
    not applicable     		MZGdb fasta (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb fasta (mode-D)
    not applicable
    Mothur-formatted
    Taxonomic Hierarchy file

    (paired with FASTA file above)    		 MZGdb Mothur (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb Mothur (mode-B)
    not applicable     		MZGdb Mothur (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb Mothur (mode-D)
    not applicable
    MZGdb v3.0

    "full format"

    go to
    Format Description    		CSV

    Excel-friendly full format
    comma-separated-values    		 MZGdb CSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb CSV (mode-B)
    not applicable     		MZGdb CSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb CSV (mode-D)
    not applicable
    PSV

    pipe-separated-values    		 MZGdb PSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb PSV (mode-B)
    not applicable     		MZGdb PSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb PSV (mode-D)
    not applicable


    MZGdb Atlas [ database-version = v2025-m03-01 ];   html-date = 2025-May-05









    Mon May 5 10:08:48 PM EDT 2025