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Paracalanidae of the ICES western North Atlantic

There are 12 species of Paracalanidae that are commonly found in the ICES western North Atlantic.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 12 total species, 11 of these species (91%) have COI barcodes (from this or any ocean).
  • There are a total of 399 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the ICES western North Atlantic region):
  • Of the 12 total species, 5 of these species (41%) have ICES western North Atlantic-collected COI barcodes.
  • There are a total of 9 "ICES western North Atlantic-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 12 total species in this region, 1 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the ICES western North Atlantic region, out of a total of 12 possible species:
    • There are COI barcodes for 11 species ( 91% coverage ), of which 5 species have barcodes sampled inside this region ( 41% coverage ).
      •
    • There are 12S barcodes for 0 species ( 0% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 2 species ( 16% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 11 species ( 91% coverage ), of which 1 species have barcodes sampled inside this region ( 8% coverage ).
    • There are 28S barcodes for 9 species ( 75% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    MZGdb Data Download Options
    ---> CLICK HERE <---


    Change Region   [ ICES North Atlantic ] [ Baltic Sea ] [ Mediterranean Sea ]
          [ ICES western North Atlantic ] [ US-NE-LME ] [ CA-Scotian ] [ CA-GSL ] [ CA-Newfoundland-shelf ]
          [ ICES eastern North Atlantic ] [ Icelandic-Waters ] [ Faroe-Islands ] [ Norwegian-Sea ] [ Barents-Sea ] [ Celtic-Seas ] [ North-Sea ] [ Iberian-Shelf ]
    Table Viewing Options   [ Species-only Summary, sorted by name (default) ]   or   [ Full Taxonomic Hierarchy ]   or   [ flat-text file of sorted species names ]


    Paracalanidae of the ICES western North Atlantic
    Taxa Name

    		Taxa
    Level    		Barcode
    Data?    		Number of
    Barcodes
    from
    any ocean    		Number of
    Barcodes
    from this region    		Barcode Locations and
    Species Occurence Map    		MZGdb Atlas
    v2023-m04-01

    2023-Apr-12
    Paracalanidae Family cummulative
    sub-totals
    ------->
    for this
    Family    		 Total Species:   12
    Sp. w/COI-Barcodes:  11

    Total COI-Barcodes:   404    		 Total Species:   12
    Sp. w/COI-Barcodes:  5

    Total COI-Barcodes:   9    		 accepted
    T4001255

    R:1:0:0:0
    ⋄   Acrocalanus Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   1    		 Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T4000309

    R:1:0:0:0
    ⋄   ⋄   Acrocalanus andersoni Species
    (1)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 1
      12S = 0
      16S = 0
      18S = 1
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4001363

    R:1:0:0:0
    ⋄   Calocalanus Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   5
    Sp. w/COI-Barcodes:  4

    Total COI-Barcodes:   10    		 Total Species:   5
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   2    		 accepted
    T4000038

    R:1:0:0:0
    ⋄   ⋄   Calocalanus contractus Species
    (2)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 1
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4000118

    R:1:0:0:0
    ⋄   ⋄   Calocalanus pavo Species
    (3)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 4
      12S = 0
      16S = 0
      18S = 3
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4000042

    R:1:0:0:0
    ⋄   ⋄   Calocalanus plumulosus Species
    (4)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 2
      12S = 0
      16S = 0
      18S = 2
      28S = 1
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4000071

    R:1:0:0:0
    ⋄   ⋄   Calocalanus styliremis Species
    (5)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 2
      12S = 0
      16S = 1
      18S = 1
      28S = 1
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4000134

    R:1:0:0:0
    ⋄   ⋄   Calocalanus tenuis Species
    (6)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 2
      12S = 0
      16S = 0
      18S = 2
      28S = 1
    		   COI = 2
      12S = 0
      16S = 0
      18S = 1
      28S = 0
    		 accepted
    T4001724

    R:1:0:0:0
    ⋄   Mecynocera Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   6    		 Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T4000718

    R:1:0:0:0
    ⋄   ⋄   Mecynocera clausi Species
    (7)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 6
      12S = 0
      16S = 0
      18S = 6
      28S = 10
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4000045

    R:1:0:0:0
    ⋄   Paracalanus Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   4
    Sp. w/COI-Barcodes:  4

    Total COI-Barcodes:   363    		 Total Species:   4
    Sp. w/COI-Barcodes:  4

    Total COI-Barcodes:   7    		 accepted
    T4000049

    R:1:1:0:0
    ⋄   ⋄   Paracalanus aculeatus
    alternate_representation
    		 Species
    (8)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 33
      12S = 0
      16S = 0
      18S = 5
      28S = 3
    		   COI = 1
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 alternate_representation
    T4000041

    R:1:0:0:0
    ⋄   ⋄   Paracalanus parvus
    alternate_representation
    		 Species
    (9)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 166
      12S = 0
      16S = 2
      18S = 23
      28S = 11
    		   COI = 1
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 alternate_representation
    T4000031

    R:1:1:0:0
    ⋄   ⋄   Paracalanus quasimodo Species
    (10)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 132
      12S = 0
      16S = 0
      18S = 1
      28S = 0
    		   COI = 4
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4003366

    R:1:0:0:0
    ⋄   ⋄   Paracalanus tropicus Species
    (11)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 32
      12S = 0
      16S = 0
      18S = 1
      28S = 10
    		   COI = 1
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4000740

    R:1:0:0:0
    ⋄   Parvocalanus Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   24    		 Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T4000074

    R:1:0:0:0
    ⋄   ⋄   Parvocalanus crassirostris Species
    (12)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 24
      12S = 0
      16S = 0
      18S = 4
      28S = 1
    		   COI = 0
      12S = 0
      16S = 0
      18S = 1
      28S = 0
    		 accepted
    T4003754

    R:1:0:0:0
    MZGdb Atlas [ database-version = v2023-m04-01 ];   html-date = 2023-Apr-12









    Wed Apr 12 14:07:31 EDT 2023