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Rhodophyta of the North Pacific

There are 978 species of Rhodophyta that are commonly found in the North Pacific.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 978 total species, 569 of these species (58%) have COI barcodes (from this or any ocean).
  • There are a total of 12515 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the North Pacific region):
  • Of the 978 total species, 0 of these species (0%) have North Pacific-collected COI barcodes.
  • There are a total of 0 "North Pacific-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 978 total species in this region, 409 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the North Pacific region, out of a total of 978 possible species:
    • There are COI barcodes for 569 species ( 58% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
      •
    • There are 12S barcodes for 0 species ( 0% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 23 species ( 2% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 211 species ( 21% coverage ), of which 60 species have barcodes sampled inside this region ( 6% coverage ).
    • There are 28S barcodes for 194 species ( 19% coverage ), of which 83 species have barcodes sampled inside this region ( 8% coverage ).
    Change Region   [ World ] [ Arctic ] [ North Atlantic ] [ South Atlantic ] [ Southern Ocean ] [ Indian Ocean ] [ South Pacific ]
    [ North Pacific ] [ Baltic Sea ] [ Mediterranean Sea ] [ Australia subregion ]
    -----> Click here to go back to the Group Summary page. <-----


    Rhodophyta of the North Pacific
    MZGdb DATA FILES

    Database-Version:   v2025-m10-01    		 --->   Mode-A   <---

    COI barcodes = 12515
    12S barcodes = 0
    16S barcodes = 28
    18S barcodes = 615
    28S barcodes = 729
    		 Mode-B

    COI barcodes = 0
    12S barcodes = 0
    16S barcodes = 0
    18S barcodes = 84
    28S barcodes = 143
    		 Mode-C

    COI records = 21647
    12S records = 0
    16S records = 47
    18S records = 1290
    28S records = 1363
    		 Mode-D

    COI records = 7243
    12S records = 0
    16S records = 1
    18S records = 153
    28S records = 214
    FASTA file (*.fasta) MZGdb fasta (mode-A)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb fasta (mode-B)
    COI | n/d | n/d | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb fasta (mode-C)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb fasta (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    Mothur-formatted
    Taxonomic Hierarchy file (*.txt)

    Paired with fasta file above    		 MZGdb Mothur (mode-A)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb Mothur (mode-B)
    COI | n/d | n/d | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb Mothur (mode-C)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb Mothur (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    DADA2 file (*.fastq)

    Single "fasta+taxa" DADA2 fastq file    		 MZGdb DADA2 (mode-A)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb DADA2 (mode-B)
    COI | n/d | n/d | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb DADA2 (mode-C)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb DADA2 (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    MZGdb v3.0

    "full format"

    go to
    Format Description    		MZGdb CSV (*.csv)

    Excel-friendly full format
    comma-separated-values    		 MZGdb CSV (mode-A)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb CSV (mode-B)
    COI | n/d | n/d | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb CSV (mode-C)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb CSV (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    PSV (*.psv)

    pipe-separated-values    		 MZGdb PSV (mode-A)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb PSV (mode-B)
    COI | n/d | n/d | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb PSV (mode-C)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb PSV (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)


    MZGdb Atlas [ database-version = v2025-m10-01 ];   html-date = 2025-Oct-27









    Mon Oct 27 03:02:59 PM EDT 2025